Code
Code associated with the paper:G.M. Donovan and G. Lythe, "T cell and reticular network co-dependence in HIV infection," Journal of Theoretical Biology, to appear 2016. [link]
Microscopic dynamics/agent based model. Python: [code will be posted shortly]
Sharing model. Python: [Share12.py]
PDE-based model. Matlab: [PDEcode.zip]